Calendar of events

Bioinformatics for PhD students - Data analysis in python (WISE)

GENERAL INFORMATION
 
The course will start on October 16th , Friday  from 9-10:30 in CIP Pool A2.4.01 (above Kuno Cafe   UKR) .
We will accept 40 students in total. You will share a computer with one other student.
 
This course is intended for "wetlab" PhD students at the LIT, UKR and neighboring institutions. It will cover basic computational tools for data organization and processing, including command line & python programming.

 
 

COURSE OVERVIEW

Nr. Date Who Thema
1 16. Okt. 2026    Nick (all for 10 min) Introduction to Bioinformatics, Data and Programming
2 23. Okt. 2026    Michael/Nick Commandline, working with bash
3 30. Okt. 2026    Michael/Nick Altering text- and tables with bash
4 6. Nov. 2026    Robert /Paul  Python I: Introduction and Datastructures
5 13. Nov. 2026    Paul/Robert  Python II: files, functions, pandas and data analysis
6 20. Nov. 2026     Ruoshi Jakob Reproducibility: Conda, Environmental Variables and Containers
7 27. Nov. 2026    Stefan/Nick R I: Introduction, RStudio, data import
8 4. Dez. 2026    Nick/Michael R II: tidyverse and visualisations with ggplot2
9 11. Dez. 2026    Jakob/Nick Introduction to Statistics for Bioinformatics
10 18. Dez. 2026    Simon/Jakob Sequence analysis: NGS-Data ,Alignment, Quality and Mapping
11 8. Jan. 2027    Stefan/Simon  AI assisted code development
12 15. Jan. 2027    Ruoshi/Stefan Workflow Management: Snakemake/Nextflow
13 22. Jan. 2027    Agata /Ruoshi Omics-Analysis: RNA-seq, an example
14 29. Jan. 2027    Jakob/Nick Versioning with Git and GitHub/GitLab
15 5. Feb. 2027     Nick/Michael Exam
 
Registration on GRIPS with your RZ Account: https://elearning.uni-regensburg.de/course/view.php?id=58464
 
RIGeL CPs: 1.5 as a Method Course
 

When and where

Date

16.10.2026 - 05.02.2026

Time:

09:00 h - 10:30 h

Place:

Universitätsklinikum Regensburg

Location:

CIP Pool A2.4.01 (above Kuno Cafe UKR)